PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00003.1.g01860.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 80aa    MW: 8890.96 Da    PI: 6.8005
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00003.1.g01860.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like47.44.3e-154775129
                         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtP 29
                                    kprl+WtpeLHerFveav+qLGG++ +t 
  Zjn_sc00003.1.g01860.1.sm.mkhc 47 KPRLKWTPELHERFVEAVNQLGGPDSTTA 75
                                    79***********************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-124575IPR009057Homeodomain-like
SuperFamilySSF466891.52E-54672IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-94775IPR006447Myb domain, plants
PfamPF002491.9E-54969IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
MFHHQQQLQS HGHFLSTRQS FPPERHLLLQ GGSVPSETGL VLSTDAKPRL KWTPELHERF  60
VEAVNQLGGP DSTTAPAIPD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002467933.15e-42hypothetical protein SORBIDRAFT_01g036680
SwissprotQ9SAK59e-15APL_ARATH; Myb family transcription factor APL
TrEMBLC5X1R05e-42C5X1R0_SORBI; Putative uncharacterized protein Sb01g036680
STRINGSb01g036680.11e-41(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2754655
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.11e-23G2-like family protein